To introduce the FLP recombinase gene under the control of an ind

To introduce the FLP recombinase gene under the control of an inducible promoter into

pKFRT, inverse-PCR was performed using the primers FRT-rightR/Inv-pUC118F. A cassette containing tetR, the Ptet promoter, and flp recombinase was amplified by PCR from pFT-A [34] using TetR-FLP2F/TetR-FLP2R, and then ligated with the inverse-PCR product of pKFRT, generating pKFRT/FLP. The sequence data have been deposited in DDBJ/EMBL/GenBank: accession numbers [AB773261] for pJQFRT and [AB773262] for pKFRT/FLP. Construction of an unmarked ataA mutant of Acinetobacter sp. Tol 5 The Tol 5 strain was mated with E. coli S17-1 harboring pJQFRT_AtaAupstream on LB medium at 28°C for 20 h. The cells were collected in 1 ml of a 0.85% NaCl solution, plated on a BS agar plate containing gentamicin (100 μg/ml), supplied with toluene vapor as a carbon Deforolimus source, and incubated at 28°C for 2 days. The resulting colonies, which were resistant to gentamicin, were confirmed for the chromosomal integration of the plasmid by PCR using the primers AtaAupstF2/FRT-SP6R; thus, the Tol 5 G4 mutant was obtained. Subsequently,

Tol 5 G4 was mated with E.coli S17-1 harboring pKFRT/FLP_AtaAdownstream using the same procedure described above, except phosphatase inhibitor library for the use of a selection plate containing kanamycin (100 μg/ml) and gentamicin (100 μg/ml). The resulting colonies, which were resistant to gentamicin and kanamycin, were confirmed for the chromosomal integration of the plasmid by PCR using the primers FRT-leftF/AtaAdwstR2; thus, the Tol 5 G4 K1 mutant was obtained. For the excision of ataA and markers by FLP/FRT recombination,

Tol 5 G4K1 was pre-cultured in 2 ml LB medium overnight. The overnight culture was diluted 1:100 in 20 ml fresh LB medium without antibiotics and incubated at 28°C. When the optical density of the culture broth at 660 nm reached 0.5, anhydrotetracycline was added to a final concentration of 400 ng/ml. After a 6 h incubation to induce the expression of FLP, Tol 5 G4K1 cells were seeded on a BS agar plate containing 5% sucrose and incubated at 28°C for 24 h. The resultant colonies, which were resistant to sucrose, were transferred using toothpicks to gentamicin- and kanamycin-containing BS agar plates. Desirable mutants that were sensitive to the antibiotics, but resistant to sucrose, were examined selleck chemical for the successful excision of the target region by PCR using the primers AtaAupstF2/AtaAdwstR2; thus, the unmarked mutant Tol 5 4140 was obtained. Protein manipulation Acinetobacter strains were grown to the stationary phase in LB medium. The optical density (OD) at 660 nm of their cultures was adjusted to 1.0 with flesh LB medium. One milliliter of the cell suspension was harvested by centrifugation, resuspended in 50 μl of SDS-PAGE sample buffer, and boiled at 95°C for 5 min. The prepared whole cell lysates were subjected to Western-blot and immunodetection as described previously [24].

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