Moreover, dNK and endometrial NK cells within the uterus were fou

Moreover, dNK and endometrial NK cells within the uterus were found to be closely related [58], and CD56bright pNK cells and CD56dim pNK cells from peripheral blood had a closer transcriptional relationship to each other than with CD56bright dNK cells

[43] (Fig. 4A). We therefore infer that Obeticholic Acid manufacturer close ontogenetic relationships among NK-cell subpopulations correlate to their maturity level and local microenvironment. Overall, by comparing the expression profile of NK-cell subpopulations, a new heterogeneous molecular basis for developmental and functional differences has been revealed. Microarray-based gene expression profiling analyses have also been used to identify the evolutionary relationship among different lineages within NK-cell subpopulations, as well as between NK cells and other immune cells, as will be discussed below in “Relationships between NK cells and other immune cells” [58-61]. An example of transcriptome-based analysis of ontogenetic relationships among NK cells is from Kopcow et al. [58], who identified that human dNK cells from gravid uteri and endometrial NK cells from cycling endometrium are distinct NK-cell populations, and Guimont-Desrochers et al. [59], who redefined

IFN-producing killer DCs as a novel intermediate in NK-cell differentiation. Expression profiles of several human immune cell populations including NK cells, CD4+ T cells, CD8+ T cells, Methane monooxygenase B cells, monocytes, myeloid DCs, plasmacytoid DCs, neutrophils, and eosinophils form a comprehensive resource Selleck BAY 57-1293 for a transcriptome database [62, 63]. This profiling can also help to elucidate the key molecules important during the establishment of immune cell identity and to identify cell-type specific microRNAs and mRNAs [62, 63]. In the mouse system, lymphoid cells including B cells, NK cells, γδ T cells, invariant NKT cells,

and αβ T-cell subsets were shown to form groups distantly related to macrophages by PCA plot analysis of all genes expressed by these populations [41, 57, 64]. In these studies, based on relatedness in the expression profile of genes, murine NK cells were shown to cluster far more closely with T cells than with any other lymphocyte population or any myeloid population, such as macrophages, conventional DCs, and plasmacytoid DCs (Fig. 4B) [41, 57, 64]. Resting NK cells and cytotoxic CD8+ T cells are known to express many molecules in common [41, 65]. Transcriptome-wide analysis indicates that these commonalities extend to hundreds of genes, many of which encode molecules with unknown function. In contrast to naïve T cells, however, resting NK cells display a “pre-primed” state containing abundant mRNAs for granzyme A, granzyme B, and perforin, which allow NK cells to respond more rapidly to viral infection [41, 65].

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